
TL;DR
- These infections don’t stay on the skin-they invade blood, lungs, brain, and organs. They can kill fast if missed.
- Highest risk: people in ICU, on chemotherapy or steroids, after transplants, with advanced HIV, uncontrolled diabetes, or after major surgery.
- Red flags: persistent fever despite antibiotics, chest pain or breathlessness, severe sinus pain with facial swelling, new severe headaches, confusion, or black tissue on the nose/palate.
- Diagnosis needs quick blood tests, imaging, and sometimes a biopsy. Treatment is urgent antifungal meds (often IV) and sometimes surgery.
- Prevention: handle mould safely, manage diabetes, ask about antifungal protection if you’re high risk, and push for early testing if you’re sick in hospital.
Fungal infections sound harmless until they hit the bloodstream, lungs, or brain. That’s when they can move fast, dodge common antibiotics, and turn a routine hospital stay into a fight for life. The goal here is simple: help you spot danger early, know who’s most at risk, and understand how doctors diagnose and treat these infections-so you can act quickly and push for the right care.
What invasive fungal infections are-and why they’re different
When most people think “fungus,” they picture athlete’s foot or a patch of ringworm. Annoying? Yes. Life-threatening? No. The infections we’re talking about here are different. They don’t sit on the surface. They invade blood, lungs, sinuses, or the brain. That’s why doctors call them invasive fungal infections.
How do they get in? Usually by inhaling tiny spores (think Aspergillus in dusty air), through a bloodstream line or surgical wound (Candida), or by direct spread from the sinuses in vulnerable people (mucormycosis). Once inside, fungi can trigger sepsis, pneumonia that doesn’t respond to antibiotics, or meningitis. They’re also sneaky: routine bacterial tests can be negative, and fevers can look “nonspecific.”
Names you’ll hear a lot:
- Candida (including Candida auris): a yeast that loves hospital gear-lines, catheters, ventilators-and can spread in wards.
- Aspergillus: a mould you can inhale; it can invade lung tissue and blood vessels.
- Cryptococcus (neoformans, gattii): linked to meningitis, especially in advanced HIV or after transplants.
- Mucorales (mucormycosis): the “black fungus” seen in uncontrolled diabetes or after heavy steroid use; it can destroy sinus and brain tissue fast.
Why the extra attention now? Two reasons. First, more people survive cancer, transplant, and ICU care-great news, but it means more people with weaker immune systems who are vulnerable to fungi. Second, antifungal resistance is rising. The World Health Organization’s Fungal Priority Pathogens List flags Candida auris and Aspergillus fumigatus as urgent concerns. CDC surveillance has reported expanding Candida auris outbreaks in hospitals through 2024-2025. Australia has detected C. auris in several hospitals over recent years too.
One more myth to ditch: these infections aren’t just “overseas problems.” After floods, homes can grow mould quickly; bushfire seasons can stir up dust and spores; and any busy ICU can see Candida in the blood. I’ve seen Melbourne hospitals tighten their screening and isolation for exactly these reasons.
Pathogen | Usual entry/organ | Who’s at highest risk | Key tests | First-line therapy (adult) | Case fatality (typical ranges) |
---|---|---|---|---|---|
Candida (candidemia) | Bloodstream via lines; spreads to organs | ICU patients, central lines, TPN, recent major surgery, broad antibiotics | Blood cultures, beta-D-glucan, echocardiogram if persistent | Echinocandin (e.g., micafungin), step-down to fluconazole if susceptible | ~25-40% |
Candida auris | Colonises skin; can cause bloodstream infection | Long hospital stays, devices, prior antifungals | Culture/PCR with species ID; colonisation screening | Echinocandin first; watch for resistance | ~30-60% (varies with illness) |
Aspergillus (invasive) | Lungs; can spread via blood vessels | Neutropenia, leukaemia, transplant, high-dose steroids, severe flu/COVID | Chest CT, galactomannan (blood/BAL), culture/PCR from BAL | Voriconazole or isavuconazole | ~30-50% |
Mucormycosis | Sinuses/brain or lungs; tissue invasion | Uncontrolled diabetes (especially DKA), iron overload, major trauma, severe immunosuppression | Urgent CT/MRI sinuses/brain/lungs; biopsy with histopath | Liposomal amphotericin B plus surgical debridement | ~40-80% |
Cryptococcus | Lungs and brain (meningitis) | Advanced HIV, transplant recipients, prolonged steroids | Serum/CSF cryptococcal antigen, lumbar puncture, culture | Liposomal amphotericin B + flucytosine (induction), then fluconazole | ~10-30% with treatment |
Sources: WHO Fungal Priority Pathogens List; CDC fungal disease surveillance; Infectious Diseases Society of America guidelines; Australian infection control advisories.
Who’s at risk and what early danger signs look like
Most healthy people fight off fungal spores without thinking about it. Risk spikes when the immune system is under heavy strain or when fungi get an open door.
Major risk groups:
- Hospital and ICU patients, especially with central lines, ventilators, or recent major surgery.
- People on chemotherapy or after bone marrow/organ transplants.
- Anyone on long or high-dose steroids or other strong immunosuppressants (e.g., for autoimmune disease).
- People with advanced HIV (low CD4 counts), uncontrolled diabetes, malnutrition, or kidney failure.
- Those recovering from severe flu or COVID who then worsen on antibiotics.
- After trauma or burns; people exposed to massive dust/soil (demolition, farming, post-disaster cleanups).
Red flags worth urgent attention:
- Fever that won’t break despite antibiotics, especially in a high-risk patient.
- New chest pain, shortness of breath, or coughing up blood in someone on chemo or steroids.
- Severe sinus pain, facial swelling, blackish discharge, or a black scab on the nose/palate-particularly in uncontrolled diabetes.
- Headache with neck stiffness, confusion, or visual changes in someone with advanced HIV or on immunosuppressants.
- Painful skin nodules that appear during a hospital stay, or eye pain/vision changes after candidemia.
Quick rule of thumb: fever + high-risk status + negative bacterial tests = push for fungal testing. If you’re in hospital and not improving, ask, “Have we ruled out a fungal infection?”
Australia-specific wrinkles: after floods, mould in homes is common; if you’re immunocompromised, don’t do the cleanup yourself. During dusty works or bushfire cleanups, wear a P2/N95 respirator. If you’re managing diabetes, keep ketones in check-diabetic ketoacidosis is a huge risk factor for mucormycosis.
How doctors find it and treat it (what to expect)
Timing matters. Each hour of delay in the right antifungal for candidemia has been linked to worse outcomes. If doctors suspect an invasive fungal infection, they tend to start testing and treatment at the same time.
Common diagnostic steps:
- Blood cultures: essential for Candida, but they can be slow and sometimes miss it.
- Fungal biomarkers: beta-D-glucan (helpful for many fungi), galactomannan (for Aspergillus), cryptococcal antigen (for cryptococcus). These aren’t perfect, but they speed things up.
- Imaging: CT of chest for lung disease; CT/MRI sinuses/brain for sinus or neurological symptoms.
- Bronchoscopy with BAL (lung washout) for culture and PCR if lung disease is suspected.
- Biopsy: often the clincher for mucormycosis or invasive Aspergillus in sinuses or lungs.
- Line/device checks: central line removal and tip culture if Candida is in the blood.
First-line treatments (big picture):
- Candidemia: start an echinocandin (micafungin, caspofungin, anidulafungin). If the Candida species is susceptible and you’re improving, doctors may switch to fluconazole after a few days.
- Aspergillus: voriconazole or isavuconazole. If the strain resists azoles, doctors may add amphotericin B.
- Mucormycosis: liposomal amphotericin B right away plus urgent surgical debridement. Azoles like posaconazole or isavuconazole may follow as step-down.
- Cryptococcus meningitis: liposomal amphotericin B plus flucytosine for a couple of weeks, then high-dose fluconazole for months, with careful pressure management in the brain.
How long does treatment run?
- Candidemia: minimum 14 days from the first negative blood culture, longer if organs like eyes or heart valves are involved.
- Aspergillus: often 6-12 weeks, tailored to immune recovery and imaging.
- Mucormycosis: weeks to months, until imaging and symptoms settle.
- Cryptococcus: several months, guided by specialist protocols.
Side effects and drug interactions to know:
- Azoles (fluconazole, voriconazole, posaconazole, isavuconazole): can affect liver enzymes and interact with many meds-statins, warfarin, some diabetes drugs, and transplant meds (tacrolimus). Doctors check blood levels for some azoles.
- Amphotericin B: the liposomal form is gentler but can still hit kidneys and electrolytes (potassium, magnesium). Expect frequent blood tests.
- Echinocandins: generally well tolerated; watch liver tests.
- Flucytosine: can suppress bone marrow; needs close monitoring.
Antifungal resistance and why it matters: fungi can resist the drugs we rely on. Candida auris is the headline case, but azole-resistant Aspergillus is also rising. Hospitals respond with isolation, environmental cleaning, and antifungal stewardship-choosing the right drug, for the right time, in the right dose.
What care looks like in hospital:
- Broad labs and imaging on day one, then repeat tests to prove clearance (e.g., daily blood cultures for candidemia).
- Device review: remove or change infected lines, drain collections, and debride dead tissue.
- Eye exam for candidemia (to exclude eye seeding), heart valve checks if persistent positive cultures.
- Infection control: isolation if Candida auris is detected; careful cleaning and staff precautions.
Credibility notes: Treatment approaches here align with Infectious Diseases Society of America and European guidelines, CDC and WHO advisories, and Australian infection control practices. Always defer to your treating team; details change with local resistance and your health status.

Prevention and practical steps you can use today
You can’t sterilise the world, but you can close the easy doors fungi use.
If you’re high risk (chemo, transplant, advanced HIV, high-dose steroids):
- Ask your doctor whether you need antifungal prophylaxis (e.g., posaconazole in some chemo regimens).
- Keep vaccinations and routine care tight-healthy lungs and skin lower risk.
- Avoid demolition sites, compost handling, and dusty sheds; wear a P2/N95 respirator if exposure is unavoidable.
- Use HEPA filtration in rooms if recommended; keep windows closed during major dust events.
At home after floods or leaks:
- Dry anything water-damaged within 24-48 hours; toss porous items (carpet, ceiling tiles) if mouldy.
- If you are immunocompromised, don’t do the cleanup yourself. Bring in help and ensure they use gloves, eye protection, and a P2/N95 respirator.
- Fix leaks quickly; keep indoor humidity under 50% if you can.
In hospital (you or a loved one):
- Ask daily: are lines needed? Removing unnecessary lines reduces candidemia risk.
- Push hand hygiene and device care-kindly but firmly.
- If not improving on antibiotics after 48-72 hours, ask, “Have we considered fungal causes? Do we need beta-D-glucan, galactomannan, or a CT scan?”
Diabetes management:
- Keep blood glucose in range; get help early for ketones or DKA-it’s a major mucormycosis risk.
- Discuss steroid downsides with your doctor if you’re on long courses; ask about taper plans.
What to do if you suspect an invasive fungal infection (step-by-step):
- If you’re high risk and have a persistent fever, chest pain, or severe sinus pain-seek medical care the same day. If you’re breathless, confused, or very unwell, call emergency services or go to the emergency department.
- Tell clinicians your risk factors up front (chemo, transplant, steroids, advanced HIV, diabetes, ICU stay, recent surgery).
- Ask about fungal testing: blood cultures, beta-D-glucan, galactomannan, cryptococcal antigen, and the right imaging.
- If you’re already in hospital, ask whether devices can be removed or replaced if infection is suspected.
- Keep a medication list handy; flag drugs that may interact with azoles (statins, warfarin, certain heart, transplant, and diabetes meds).
Simple decision cues you can memorise:
- High risk + fever + no bacterial source = push for fungal tests.
- Uncontrolled diabetes + sinus/facial pain or black tissue = emergency evaluation for mucormycosis.
- After severe flu/COVID + new chest symptoms not improving on antibiotics = ask about Aspergillus testing.
- Advanced HIV + headache/fever = urgent cryptococcal antigen test.
Examples, checklists, and a quick cheat sheet
Real-world snapshots help you see how this plays out.
Example 1: The stubborn ICU fever
A 62-year-old has a central line and TPN after bowel surgery. On day 5, he stays febrile despite broad antibiotics. Blood cultures later grow Candida. Doctors start an echinocandin, remove the line, repeat cultures daily, order an eye exam, and treat for at least 2 weeks after the first negative culture. He improves once the line is out and the drug hits the right target.
Example 2: Breathlessness after steroids
A woman with leukaemia on high-dose steroids develops chest pain and haemoptysis after recovering from influenza. Chest CT shows nodules; galactomannan is positive. She starts voriconazole. Her team tracks drug levels and liver tests and adjusts meds that interact. She completes a 10-week course while her counts recover.
Example 3: Sudden facial pain in diabetes
A man with poorly controlled diabetes develops severe sinus pain, facial swelling, and a black crust inside his nose. Imaging and urgent ENT review lead to surgery and liposomal amphotericin B. Fast action saves his eye and brain.
Red-flag checklist you can carry:
- Are you on chemo, a transplant patient, or on high-dose/long-term steroids?
- Do you have persistent fever not responding to antibiotics?
- Any severe sinus/facial pain or black tissue in the nose or palate?
- New chest pain, breathlessness, or coughing blood after severe flu/COVID?
- New severe headache, neck stiffness, or confusion with immune compromise?
Hospital conversation checklist:
- Can we remove or replace unnecessary lines and catheters?
- Have we sent blood cultures and fungal biomarkers?
- Do we need a chest CT, sinus CT/MRI, or bronchoscopy?
- If Candida auris is detected, what isolation steps and cleaning protocols are in place?
- Any drug interactions to watch with azoles? Who is monitoring levels and liver/kidney tests?
Cheat sheet: common antifungal classes
- Echinocandins (micafungin, caspofungin, anidulafungin): first choice for candidemia; IV only; minimal interactions.
- Azoles (fluconazole, voriconazole, posaconazole, isavuconazole): many oral options; watch interactions and liver tests; key for Aspergillus and step-down therapy.
- Polyenes (liposomal amphotericin B): broad and powerful; kidney and electrolyte monitoring needed; cornerstone for mucormycosis and cryptococcal induction.
- Flucytosine: used with amphotericin B in cryptococcal meningitis; watch blood counts.
Pitfalls to avoid:
- Waiting for every test to be perfect before starting therapy in a crashing patient.
- Keeping a central line in place after candidemia is confirmed.
- Assuming “no growth yet” means “no fungus”-cultures can be slow.
- Ignoring drug interactions with azoles.
- Stopping treatment too early before imaging and symptoms settle.
FAQ, next steps, and troubleshooting for different scenarios
Short FAQ
- Are invasive fungi contagious? Candida auris can spread in hospitals via surfaces and hands. Most others aren’t casually contagious but can affect multiple people exposed to the same environment (e.g., dust-heavy worksites).
- Do regular antibiotics treat fungal infections? No. Antibiotics don’t touch fungi and can even increase risk by disrupting normal flora.
- Should I take over-the-counter antifungals “just in case”? No. These are for superficial infections and won’t treat bloodstream or lung disease. You need specialist care.
- Can healthy people get invasive infections? Rarely, but it happens in extreme exposures (major trauma, natural disasters) or with unique species. Risk is much higher with immune compromise.
- Is mould in the house the same as invasive disease? Not usually. But for immunocompromised people, heavy mould exposure can lead to serious problems-get help with cleanup.
Next steps if you’re a patient or carer
- Track symptoms daily: fever, pain, breathing, headaches, new rashes.
- Keep a medication list, including supplements. Bring it to appointments.
- Ask your team who’s watching liver and kidney tests and drug levels.
- If sent home on antifungals, clarify dose, timing, food needs, and missed-dose instructions. Ask what side effects mean “call now.”
- Arrange early follow-up (within 1-2 weeks) and confirm which imaging or labs you’ll need.
Next steps if you’re a GP
- High-risk patient with persistent fever or focal symptoms? Send to ED or fast-track to specialists. Order blood cultures and consider beta-D-glucan while arranging transfer.
- On azole therapy? Review drug interactions, check LFTs, and monitor QT interval where relevant.
- Post-hospital follow-up: confirm clearance documentation (e.g., negative cultures), eye exam result for candidemia, duration plan, and adherence.
For transplant and oncology patients
- Confirm prophylaxis plan (drug, duration, level monitoring) before starting chemotherapy or immunosuppression.
- Have a low threshold for CT and fungal biomarkers with new fevers or respiratory symptoms.
- Use protective environments (HEPA rooms) when indicated; avoid renovation zones.
For people with diabetes
- Keep glucose and ketones in target; seek help early for DKA symptoms.
- Sinus pain or facial swelling is an emergency-don’t wait for it to settle.
For workers in high-exposure settings (demolition, farming, waste, post-disaster)
- Wear P2/N95 respirators, goggles, gloves; damp down dust before disturbance.
- Shower and change clothes after shifts; launder separately if heavily dusty or mouldy.
Troubleshooting common hurdles
- “All tests are negative but the patient is crashing.” Involve infectious diseases early; start empiric antifungal therapy if risk and story fit. Repeat testing, get tissue if possible.
- “Patient can’t tolerate amphotericin B.” Discuss liposomal formulation, pre-hydration, electrolyte replacement, and alternative agents if appropriate.
- “Azole interactions are a mess.” Use interaction checkers, adjust doses of interacting meds (e.g., tacrolimus), and consider echinocandins if suitable.
- “Candida auris in the ward.” Escalate infection control: single room, contact precautions, dedicated equipment, and enhanced cleaning with approved agents. Screen close contacts as advised.
Key sources you can mention to your care team: CDC fungal disease updates (2024-2025), WHO’s Fungal Priority Pathogens List, IDSA invasive candidiasis/aspergillosis/cryptococcosis guidelines, and Australian infection control frameworks. These guide the tests and treatments you’ll be offered.
Final thought: speed saves lives here. If your gut says something’s off-especially in a high-risk setting-speak up, ask for fungal testing, and get the right team at the bedside.